Okey, so this is how far I have come on my plot. This is just a cropped version of the total plot, each column is a chromosome and where the points (SNPs or genetic marker) are placed along the y-axis depends on their significance. The ones under the red line are the actual significant ones.
I still have a lot to improve and still so many different things I will try with the data, but this is a step in the right direction.
PS: did you see the chess game yesterday? It was fantastic! So exiting! And we will see in just a couple of hours if we today will have the first Norwegian World Champion of Chess 🙂